1385 citations
0 runs

reconcile-tree-alignment

By Bailey T., Elkan C., Last update 1494698999
All tools Run in Terminal

reconcile-tree-alignment description

Reconcile-tree-alignment identifies the intersection of the sets of sequence IDs and leaf labels given a tree and an alignment. It also trims the extra sequences and leaves and print the resulting alignment and tree.


Parent program: meme

MEME is a tool for discovering motifs in a group of related DNA or protein sequences. MEME takes as input a group of DNA or protein sequences and outputs as many motifs as requested up to a user-specified statistical confidence threshold. MEME uses statistical modeling techniques to automatically choose the best width, number of occurrences, and description for each motif.