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fastx_quality_stats

By Gordon A., Hannon G., Last update 1494698999
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fastx_quality_stats description

Fastx_quality_stats compute various quality statistics (e.g. lowest, highest, mediam, mean, etc quality score per column - column here represent a position in a read)


Parent program: fastx_toolkit

FASTX-Toolkit is a software package for preprocessing output data produced by Next-Generation sequencing machines in FASTA and FASTQ format before the main processing (assembling, mapping etc.). FASTQ to FASTA conversion, statistics calculation, file customization, quality-based preprocessing, trimming and etc. can be provided.