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bamtools resolve

By Barnett D., Marth G., Last update 1494698999
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bamtools resolve description

Bamtools_resolve resolves paired-end reads in BAM files. The resolving mode is required, and it can be -makeStats, -markPairs, or -twoPass.

Parent program: bamtools

BAMTools is a toolkit for managing genome alignment data in BAM and SAM formatted files. It is consists of set of tools for conversion, filtration, sorting, merging, and splitting files, or printing some basic and statistical information. BamTools can also generate BAI or BTI index files for BAM file. This suite shows some overlaps of manipulation modules with SAMtools toolkit but supports features that extend the abilities in genome alignment data analysis.